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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015814740.1_cds_XP_016498044.1_12117
CDS Infomation

[gene=LOC107816814] [db_xref=GeneID:107816814] [protein=protein POOR HOMOLOGOUS SYNAPSIS 1] [protein_id=XP_016498044.1] [location=complement(join(14433..14491,14794..14821,14948..15003,15090..15286,15388..15491,15581..15646,16432..16548,22897..23214))] [gbkey=CDS]
Sequence

ATGGCGGGATCACATTTACTTTCACTGCCAGCAACAGCGGCGGCAGAGCAGTCGGAGCTG
CCGCCGGCGTCAATGGCAATCGCCTCCGTAACAAACCAGTGGGAAGTTGAATACGCTCGG
TTCATCCTCTATCCTCCAGCTTCTCCTCATCCCTCTCATCCGTCCCTCATCCCTCTTTCT
TCCACCAGACGAAAGCACTGTAAAGGCGGCAAATGGATCTCCTCTTCCTCCCTCGTTTCT
CTCAAACTCCGCACTGATAGATCCGATCCTGATCGCGGTTTCATCCTCGTCCTCGCTATC
CGTGATCACATGATCCTCGAAGAGCATTACGTTTCGAGGCTGATGTTCTCATGGCCTCAG
GTCTCATGTGTGTCAGGTTTTCCAACAAGGGGAACTAGAGCTGTCTTTGTGAGCTATAGG
GATTCTGTAGGCCAGATTCAGAAATTCGTCCTGCGGTTCTTGACAATCTACGAGATAGAG
AATTTCATGAATGTTTTAAAGGGAAAGTTGGACAGTGCAAGTCCTCCTGCTCTTCCGTGT
CTTGAATTTGATTCAGTGATATCTTCTCAATCTGAGTTTATTCCTTTCGGTGGAGCTTCA
CAAAGGGACAATGAAGGATGGATATATACAGCTTCAGGTGACTCTAGTTCCCATCATATG
CCAGTGACCTGGGCACCTGGATTTTCTCAAGGTTCACATACAGAGGAAATGAGACTAAAT
CGCGAAGCTGAGGAGATTCTTTCAGCTTTTCCTCCCAGTTTCACGTCCTTCTTGATGAAC
TGCGGCCCTGAAGTTGATCAAGTTGCTGTTGCACAGTCGAGTACGACGAAGGAGGTTGAC
CTTAAAGACCAAATTGCGAAATATCTAGAAGATTCTTCATTCCAAGATATGCTGGTCAAA
GTTGAGGAAGTCATCCGTGAATTGGGAGATAATACAGTGCTGTAG

Peptide Sequence

PEP ID

XP_016498044.1
PEP Infomation

PREDICTED: protein POOR HOMOLOGOUS SYNAPSIS 1 [Nicotiana tabacum]
Sequence

MAGSHLLSLPATAAAEQSELPPASMAIASVTNQWEVEYARFILYPPASPHPSHPSLIPLS
STRRKHCKGGKWISSSSLVSLKLRTDRSDPDRGFILVLAIRDHMILEEHYVSRLMFSWPQ
VSCVSGFPTRGTRAVFVSYRDSVGQIQKFVLRFLTIYEIENFMNVLKGKLDSASPPALPC
LEFDSVISSQSEFIPFGGASQRDNEGWIYTASGDSSSHHMPVTWAPGFSQGSHTEEMRLN
REAEEILSAFPPSFTSFLMNCGPEVDQVAVAQSSTTKEVDLKDQIAKYLEDSSFQDMLVK
VEEVIRELGDNTVL

Transcript Sequence

Gene sequence data has not been registered.